Information for 3-AWKMRTTAAACWY (Motif 5)

C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
Reverse Opposite:
C T G A C G A T A C T G A C G T A C G T A C G T C G T A C G T A A G C T A C T G G T A C C G T A C G A T
p-value:1e-12
log p-value:-2.847e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.8 +/- 30.5bp
Average Position of motif in Background50.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AWKMRTTAAACWY
----ATTAAA---
 C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AWKMRTTAAACWY-
CGAATTAATTAAATACT
 A C G T A C G T A C G T C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AWKMRTTAAACWY-
NNAATTAATTAAAAANN
 A C G T A C G T A C G T C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AWKMRTTAAACWY
-----GTAAACAA
 C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AWKMRTTAAACWY-
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AWKMRTTAAACWY
-WWATRTAAACAN
 C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PH0091.1_Lhx1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AWKMRTTAAACWY-
CGAATTAATTAATAATG
 A C G T A C G T A C G T C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AWKMRTTAAACWY
---AAATAAACA-
 C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AWKMRTTAAACWY-
CGAATTAATTAAAAACC
 A C G T A C G T A C G T C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AWKMRTTAAACWY
-----GTAAACA-
 C G T A C G A T A C T G G T A C C T G A A C G T A C G T C G T A C G T A C G T A A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T