Information for 17-CTGCCAGTTCTCT (Motif 45)

A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A C T G C G T A C G T A A G T C A C G T A C T G A C T G A T G C G T C A C T A G
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 21.6bp
Average Position of motif in Background57.8 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGCCAGTTCTCT----
CGAACAGTGCTCACTAT
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCCAGTTCTCT
-TGGCAGTTGN--
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCAGTTCTCT
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCCAGTTCTCT
-TGCCAA------
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCAGTTCTCT
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PKNOX1/MA0782.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCCAGTTCTCT
-TGACAGGTGTCA
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCCAGTTCTCT
-TGGCAGTTGG--
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAGTTCTCT
CGTGCCAAG-----
 A C G T A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGCCAGTTCTCT
TTGCCAAG-----
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGCCAGTTCTCT
ATGCCAGACN---
 A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C G T A C G T A G T C A C G T A G T C A G C T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T