Information for 13-TTGGCCCTCG (Motif 16)

A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
Reverse Opposite:
A G T C C T A G G T C A A C T G T A C G T C A G A G T C A G T C C G T A G T C A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.844
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif93.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets56.7 +/- 29.4bp
Average Position of motif in Background44.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCCTCG
NTTGGCANN--
 A C G T A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCCCTCG
TTGGCA----
 A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCCTCG
NNTTGGCANN--
 A C G T A C G T A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCCTCG
CCGATTGGCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCCTCG---
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCCCTCG
CNNTTGACCTTTG
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGGCCCTCG
CTGACCTTTG
 A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGGCCCTCG
TTCCCCCTAC
 A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGGCCCTCG
-TGACCT---
 A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTGGCCCTCG-------
-GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G T C A G A G T C A G T C A G T C C A G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G