Information for 16-GGAGCTGCTA (Motif 36)

A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
Reverse Opposite:
A C G T C G T A A T C G A G T C C G T A A C T G A T G C C G A T A G T C A G T C
p-value:1e-4
log p-value:-9.735e+00
Information Content per bp:1.907
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif114.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets60.5 +/- 31.3bp
Average Position of motif in Background47.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGCTA----
AGATGCTRCTRCCHT
 A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGCTA
AGCAGCTGCT-
 A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGCTA
CGCAGCTGCG-
 A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCTGCTA--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGCTA
CGGAGC-----
 A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCTGCTA
NNAGCAGCTGCT-
 A C G T A C G T A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAGCTGCTA
NCAGCTGCTG
 A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGCTA
NNGCAGCTGTC-
 A C G T A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGCTA
NNGCAGCTGTT-
 A C G T A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGCTA--
TGCAGCTGTCCCT
 A C G T A C T G A C T G G C T A T A C G A G T C A C G T A C T G A T G C A C G T C G T A A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T