Information for 1-CGTTTCBGTTTTT (Motif 1)

A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A C T G A G T C A G T A C T A G C A C T G C G T A C G T A C G T A A G T C A C T G
p-value:1e-16
log p-value:-3.815e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 19.1bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTCBGTTTTT
CAGTTTCGNTTCTN
 A C G T A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTTTCBGTTTTT
AGTTTCAKTTTC-
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCBGTTTTT
NTGGTTTCGGTTNNN
 A C G T A C G T A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCBGTTTTT
TNAGTTTCGATTTTN
 A C G T A C G T A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGTTTCBGTTTTT
RSTTTCRSTTTC-
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGTTTCBGTTTTT
TCAGTTTCATTTTCC
 A C G T A C G T A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGTTTCBGTTTTT
AGTTTCAGTTTC-
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTTCBGTTTTT-
AGTTTCGGTTTCGN
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTTCBGTTTTT
ACTTTCACTTTC-
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTTCBGTTTTT--
CCTTGCAATTTTTNN
 A G T C A C T G A C G T A C G T C G A T A G T C A C T G A C T G A C G T A G C T A C G T A G C T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C