Information for 21-CACGTCTTTR (Motif 33)

G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
Reverse Opposite:
A G C T C G T A C T G A C G T A A C T G G T C A A G T C A C T G G A C T A C T G
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.789
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.5 +/- 18.2bp
Average Position of motif in Background52.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACGTCTTTR---
TTTTACGACTTTCCAT
 A C G T A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTTTR
GCACGTAY---
 A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CACGTCTTTR
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTTTR
GCACGTNC---
 A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCTTTR
AACACGTGTT--
 A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACGTCTTTR
GCACGTACCC-
 A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCTTTR
BGCACGTA----
 A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CACGTCTTTR-
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CACGTCTTTR
GTGCCACGTCATCA
 A C G T A C G T A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACGTCTTTR
GGCACGTGTC--
 A C G T A C G T G T A C C G T A G T A C A C T G A C G T G T A C A C G T A G C T A C G T C T G A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T