p-value: | 1e-8 |
log p-value: | -1.970e+01 |
Information Content per bp: | 1.786 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.52% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.5 +/- 26.1bp |
Average Position of motif in Background | 49.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0206.1_Zic2_2/Jaspar
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG -TCNCCTGCTGNGNNN |
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GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TTCCCTTGBTGDGTGG--- -------CGTGGGTGGTCC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG -TNTCCTGCTGTGNNG |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG----- ----NTNNTTAAGTGGNTNAN |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCCCTTGBTGDGTGG -NCCATTGTTC----- |
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ZNF354C/MA0130.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 12 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG-- ------------GTGGAT |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTCCCTTGBTGDGTGG------ -----GTATTGGGTGGGTAATT |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG-- -------CTTGAGTGGCT |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCCCTTGBTGDGTGG ANNTCCATTGTTCNNN-- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTCCCTTGBTGDGTGG----- ----NTNNTTAAGTGGTTANN |
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