Information for 8-GGAAAACCCACATGCB (Motif 17)

A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
Reverse Opposite:
T A G C C A T G A T G C C G T A C A G T A C T G A C G T A C T G A C T G A T C G C G A T A C G T A C G T C G A T A G T C A G T C
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 12.4bp
Average Position of motif in Background33.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB
GGAAANCCCC------
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB
GGACCACCCACG----
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB
GGAAATCCCC------
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGAAAACCCACATGCB
----AAACCACANN--
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB
GGAAATTCCC------
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB
----AAACCACAGAN-
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GGAAAACCCACATGCB--
------ACCACATCCTGT
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGAAAACCCACATGCB
---NWAACCACADNN-
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAAAACCCACATGCB
-TCCAATCCACA----
 A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAACCCACATGCB
TGGAAAA----------
 A C G T A C T G A C T G C G T A G T C A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C G T A T C G G T A C A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T