Information for 7-CAAAGGAAAGCGCCGC (Motif 16)

A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
Reverse Opposite:
A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C G T A C G T A G C T A G T C G T A C A C G T A G C T A C G T A T C G
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.8 +/- 9.6bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAAAGGAAAGCGCCGC
----GGAAATCCCC--
 A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAAAGGAAAGCGCCGC
----GGAAANCCCC--
 A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGGAAAGCGCCGC
AGAAACGAAAGT-----
 A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAAAGGAAAGCGCCGC
GAGAACCGAAACTG----
 A C G T A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAAAGGAAAGCGCCGC
CAAAGGTCAG------
 A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAAAGGAAAGCGCCGC
----GGAAATTCCC--
 A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CAAAGGAAAGCGCCGC
TCAGCACCATGGACAGCTCC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAAAGCGCCGC
TATAGATCAAAGGAAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAAAGCGCCGC
TTCAGCACCATGGACAGCGCC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAAGGAAAGCGCCGC
GAAASYGAAASY-----
 A C G T A T G C C G T A C T G A C G T A A C T G A C T G C T G A G T C A C G T A A C T G T A G C C T A G A G T C A G T C A C T G G T A C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T A C G T