Information for 2-TGGCCGKCCCCAGMCY (Motif 4)

A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
Reverse Opposite:
C T A G A C T G A C G T A G T C A C G T A C T G T A C G A C T G A C T G G T C A G T A C C T A G A C T G A G T C A T G C C G T A
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.2 +/- 21.3bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCCGKCCCCAGMCY
KGCCCTTCCCCA----
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TGGCCGKCCCCAGMCY-
---------BCAGACWA
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGGCCGKCCCCAGMCY
----CGCCCCCTGACA
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGKCCCCAGMCY
TTGGCA-----------
 A C G T A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGGCCGKCCCCAGMCY
-GCCCCGCCCCCTCCC
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TGGCCGKCCCCAGMCY
-TGCCTGCGYCMCCTT
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGKCCCCAGMCY-
BTGACCTCTNNHTGACCY
 A C G T A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCGKCCCCAGMCY
NTTGGCANN---------
 A C G T A C G T A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:TGGCCGKCCCCAGMCY-
---------CCAGACAG
 A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGKCCCCAGMCY
TCACCCCGCCCCAAATT
 A C G T A C G T A T C G A C T G A G T C A G T C A C T G A C G T A G T C G T A C A T G C G T A C C G T A C T A G G T C A G T A C G A C T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T