Information for 7-GCTTTTAAAAGCA (Motif 15)

A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
Reverse Opposite:
A C G T A C T G G T A C G A C T A G C T A G C T A C G T C G T A C G T A G C T A C G T A C T A G A T G C
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.707
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets29.3 +/- 17.7bp
Average Position of motif in Background50.8 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTTTTAAAAGCA
CCTTTTATAGNC-
 A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTTTTAAAAGCA
GCTATAAATAGC-
 A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTTTTAAAAGCA
CGGTTTCAAA----
 A C G T A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTTTTAAAAGCA
NGCAATTAAA----
 A C G T A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTTTTAAAAGCA
ACTATAAATAGA-
 A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTTTTAAAAGCA
TCTAAAAATAGA-
 A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTTTTAAAAGCA
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTTTTAAAAGCA
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTTTTAAAAGCA
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTTTTAAAAGCA
-NTTTTACGAGN-
 A T C G A G T C C G A T C G A T G C A T G A C T G T C A C T G A T C G A C T G A A C T G G T A C G T C A
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T