Information for 6-GASKGCGMTGTYT (Motif 6)

A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A A G T C C G T A A C G T A G T C A T C G A G T C G T A C A T G C A C G T A G T C
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.8 +/- 12.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GASKGCGMTGTYT-----
-AAGACGCTGTAAAGCGA
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GASKGCGMTGTYT-----
-AAGACGCTGTAAAGCGA
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GASKGCGMTGTYT-----
-AGGACGCTGTAAAGGGA
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GASKGCGMTGTYT-------
---NNTNNTGTCTGGNNTNG
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GASKGCGMTGTYT----
-----SCHTGTTTACAT
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GASKGCGMTGTYT
AGGVNCCTTTGT--
 A C G T A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GASKGCGMTGTYT--
-------CTGTCTGG
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GASKGCGMTGTYT--
-------CTGTTTAC
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GASKGCGMTGTYT--
--------TGTTTAC
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GASKGCGMTGTYT--
--------TGTTTAC
 A C T G C G T A A T C G C A T G A C T G A T G C C T A G G T A C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C