Information for 14-TGCATTAAATGAA (Motif 14)

A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C G T C G A T C G A T C G T A G T C A C G A T C A T G A T G C C G T A
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 18.3bp
Average Position of motif in Background55.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCATTAAATGAA----
-ACTATGAATGAATGAT
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCATTAAATGAA---
-TAATTCAATGAAGTG
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCATTAAATGAA-------
---NTTNTATGAATGTGNNC
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCATTAAATGAA---
--NNTNTCATGAATGT
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCATTAAATGAA----
TGCTTTCTAGGAATTCA
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCATTAAATGAA-
NGCTTTCTAGGAAN
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCATTAAATGAA------
---NNNTATTGAATTGNNN
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCATTAAATGAA---
TGAACTCNATGAACTC
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCATTAAATGAA---
-CCATTGTATGCAAAT
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PH0128.1_Otp/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCATTAAATGAA-----
-CNNATTAATTAATTNNN
 A C G T A T C G G A T C C G T A A C G T A C G T C G T A C G T A G T C A C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G