p-value: | 1e-10 |
log p-value: | -2.500e+01 |
Information Content per bp: | 1.891 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 39.8 +/- 21.1bp |
Average Position of motif in Background | 33.9 +/- 18.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GAGSGCGRTGTCTSCA -----VBSYGTCTGG- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GAGSGCGRTGTCTSCA -------CTGTCTGG- |
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Klf12/MA0742.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGSGCGRTGTCTSCA NANAAGGGCGTGGTC---- |
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PB0039.1_Klf7_1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGSGCGRTGTCTSCA NNAGGGGCGGGGTNNA-- |
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KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGSGCGRTGTCTSCA NNVDGGGYGGGGCYN--- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GAGSGCGRTGTCTSCA -------TWGTCTGV- |
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Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGSGCGRTGTCTSCA RGKGGGCGGAGC----- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGSGCGRTGTCTSCA---- ---NNTNNTGTCTGGNNTNG |
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PB0076.1_Sp4_1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GAGSGCGRTGTCTSCA NNNAAGGGGGCGGGNNN---- |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GAGSGCGRTGTCTSCA-- ------SCTGTCARCACC |
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