Information for 11-AATATGTATATAT (Motif 11)

C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
Reverse Opposite:
C T G A C G A T C T G A A C G T C T G A A C G T C G T A A G T C C G T A A G C T C G T A A G C T C G A T
p-value:1e-1
log p-value:-4.047e+00
Information Content per bp:1.927
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATATGTATATAT-----
-ANNNGGATATATCCNNN
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AATATGTATATAT
--TATGTAAATAT
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATATGTATATAT---
NANTTATATATAANGN
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATATGTATATAT
NNTATANATATACN-
 A C G T A C G T C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATATGTATATAT---
-AYATGYATATGCATR
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AATATGTATATAT
--TATGTAAATAT
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATATGTATATAT-
TNNATTATGCATANNTT
 A C G T A C G T A C G T C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATATGTATATAT
AATATGCAAATT-
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AATATGTATATAT
---ATGMATATDC
 C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AATATGTATATAT
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T C G T A C T G A A C G T C T G A A C G T C T A G A C G T C G T A A G C T C G T A A G C T C G T A A G C T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T