Information for 4-TGTAGCCAAGCCCTCC (Motif 9)

A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A T C G C T A G A C T G T A G C A C G T A C G T A C T G A C T G A G T C A G C T C G T A T A G C G T C A
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.746
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 26.4bp
Average Position of motif in Background21.7 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP4/MA0685.1/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGTAGCCAAGCCCTCC--
-TAAGCCACGCCCCCTTT
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGTAGCCAAGCCCTCC
---TGCCAA-------
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGTAGCCAAGCCCTCC
-CGTGCCAAG------
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCCAAGCCCTCC
NNNGTAACTANGNNA---
 A C G T A C G T A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGTAGCCAAGCCCTCC--
--NNGGCGACACCTCNNN
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCCAAGCCCTCC
AATGTATCAAT-------
 A C G T A C G T A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCCAAGCCCTCC-
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:TGTAGCCAAGCCCTCC
------AAATCACTGC
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TGTAGCCAAGCCCTCC--
---GACCACGCCCTTATT
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:TGTAGCCAAGCCCTCC
----GCCACRCCCACY
 A C G T A T C G G C A T C T G A C T A G G T A C G T A C G T C A T C G A A T C G G T A C G A T C T A G C C G A T A T G C A G T C
A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T