Information for 6-ACAAATATTT (Motif 5)

C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
Reverse Opposite:
G T C A C G T A T G C A G A C T C T G A G A C T G A C T C G A T A C T G G C A T
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.669
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif792.7
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets45.1 +/- 30.4bp
Average Position of motif in Background48.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACAAATATTT-----
-CTAATATTGCTAAA
 C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACAAATATTT-----
-CTAATATTGCTAAA
 C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACAAATATTT
--AATTATT-
 C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTT
AAACAAACATTC
 A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAATATTT
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACAAATATTT-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACAAATATTT
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTT
NAACATATGTTT
 A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

MYF6/MA0667.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAAATATTT
AACAGCTGTT-
 A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ACAAATATTT
NNCNNAACAATTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G C T A C T G A C T G A G A C T C T G A A C G T G C A T C A G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T