Information for 5-TCTTGTTCTTGCTYYT (Motif 3)

A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
Reverse Opposite:
C T G A C T A G C T A G C G T A A C T G A G T C G T C A C G T A C T A G G T C A C G T A A G T C C G T A C T G A C T A G G T C A
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 27.8bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTTGTTCTTGCTYYT
GTNTTGTTGTGANNT--
 A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTTGTTCTTGCTYYT-
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGTTCTTGCTYYT
NCNTTTGTTATTTNN---
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTTGTTCTTGCTYYT
--CTGTTCCTGG----
 A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGTTCTTGCTYYT
NNTTTTGTTTTGATNT--
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGTTCTTGCTYYT
AANTTATTGTTCTNNA----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTGTTCTTGCTYYT
NNNTGTTGTTGTTNG-
 A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTTGTTCTTGCTYYT
TAATTGTTCTAAAC---
 A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGTTCTTGCTYYT
NNTTTATTGTTCTNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTGTTCTTGCTYYT
NNNTCCTTTGTTCTNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A G C T A G C T A G C T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T