Information for 9-TGGGCTTTTTGGCTCY (Motif 11)

A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
Reverse Opposite:
C T G A A C T G G C T A T A C G A T G C G A T C C T G A T G C A C G T A C G T A C G T A A C T G A G T C A G T C G T A C T C G A
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.730
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.2 +/- 27.1bp
Average Position of motif in Background39.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCTTTTTGGCTCY
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCY
TTGACTTTT-------
 A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCY
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCY
CCTTGCAATTTTTNN----
 A C G T A C G T A C G T A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCY
NGGGATTA--------
 A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCY
--NCCTTATCTG----
 A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCTTTTTGGCTCY
TTGACCTTTTGACCTT-
 A C G T A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCY
--NGCTN---------
 A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCTTTTTGGCTCY
NTNTTCTTATCAGTNTN
 A C G T A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGGGCTTTTTGGCTCY
--NNCTTATCTN----
 A G C T A C T G T A C G C T A G A G T C C G A T A C G T C G A T A C G T A G C T C A T G A T C G A G T C C A G T A G T C A G C T
A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T A C G T