Information for 6-GAAATGTTACATG (Motif 4)

A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G
Reverse Opposite:
A G T C C G T A C A G T C T A G C G A T C G T A C G T A G T A C C G T A A C G T A C G T A C G T A G T C
p-value:1e-15
log p-value:-3.614e+01
Information Content per bp:1.859
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 27.1bp
Average Position of motif in Background38.4 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0087.1_Irx6/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--ANTTNTACATGTANTTN
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--ANTNNTACATGTANNTN
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--ANTNTTACATGTATNTA
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--NNTTTTACATGTANNNT
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--ANTATTACATGTANNNN
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAATGTTACATG-
---ANGTTACATAA
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAAATGTTACATG
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAATGTTACATG
AAAATTGTTATGAA
 A C G T A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAATGTTACATG------
--NNTATTACATGTANNNT
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAATGTTACATG
--ATTGTTA----
 A C T G C G T A C G T A G T C A A C G T A C T G A C G T C G A T C G T A A G T C G C T A A C G T C T A G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T