Information for 8-TTGTAGTACC (Motif 13)

C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C
Reverse Opposite:
A C T G C T A G C G A T T C G A T A G C C A G T C T G A G A T C G T C A G T C A
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.685
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif148.4
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets61.0 +/- 22.5bp
Average Position of motif in Background52.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTAGTACC-
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTAGTACC----
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGTAGTACC-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTGTAGTACC---
NAATTTTATTACCTNN
 A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTAGTACC
GGGAATTGTAGT---
 A C G T A C G T A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGTACC----
ADGGYAGYAGCATCT
 A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGTAGTACC-----------
-TGCAGTTCCNNNNNTGGCCA
 C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGTAGTACC
CCATTGTTNY---
 A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGTAGTACC---
NAATTTTATTACCNNN
 A C G T A C G T A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGTAGTACC------
TTCNAAGTACTTNNNNN
 A C G T C A G T C A G T C T A G G A C T G T C A A T C G A G C T G C T A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T