Information for 7-ATTCAAAGAG (Motif 12)

C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A C G T A C G T C G A T C A T G C T G A C T G A G C A T
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.834
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif84.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets71.1 +/- 21.5bp
Average Position of motif in Background52.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAAGAG
NATTCAAAT--
 A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAAGAG
CGGTTTCAAA---
 A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAAGAG
ACATCAAAGG-
 A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAAGAG-
AAAGATCAAAGGAA
 A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAAGAG-
ACATCAAAGGNA
 A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAAGAG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAAGAG
ATTTCCAAGAA
 A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTCAAAGAG---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAAGAG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTCAAAGAG---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T C G T A A G C T G A C T G T A C G C T A G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T