Information for 6-TTTGAAATTC (Motif 11)

A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
Reverse Opposite:
T C A G G C T A C G T A G A C T C A G T C G A T G A T C G T C A T C G A T C G A
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.646
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif789.8
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets53.7 +/- 28.8bp
Average Position of motif in Background51.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TTTGAAATTC
TTTGAAACCG
 A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATTC
CCTTTGATGT--
 A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAATTC
ATTTGAATT--
 A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAATTC
TNCCTTTGATCTTN
 A C G T A C G T A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATTC
CCTTTGAWGT--
 A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTGAAATTC--
TTGAATGAAATTCGA
 A C G T A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTGAAATTC--
--GGAAATTCCC
 A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAATTC
NATTGTGCAAT--
 A C G T A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAATTC
TNCCTTTGATGT--
 A C G T A C G T A C G T A C G T A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGAAATTC--
--GGAAATTCCC
 A G C T A G C T C A G T C T A G G C T A G T C A C T G A G A C T C G A T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C