Information for 5-TGCCAGCTGCCCCCCG (Motif 11)

C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
Reverse Opposite:
A G T C A T C G A C T G A C T G A T C G T C A G C T A G A T G C C T G A A T C G G T A C C G A T C T A G A T C G A G T C C G T A
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 26.2bp
Average Position of motif in Background57.6 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGCCCCCCG
-TGCAGCTGTCCCT--
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCCAGCTGCCCCCCG
-GCCAGCTGBTNB---
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGCCCCCCG
-AGCAGCTGCTNN---
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGCTGCCCCCCG
CTCAGCAGCTGCTACTG-
 A C G T A C G T C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCTGCCCCCCG
NNVVCAGCTGBN-----
 A C G T C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCTGCCCCCCG
NNGCAGCTGTC-----
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCCAGCTGCCCCCCG
NNACAGCTGC------
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCCAGCTGCCCCCCG
--NCAGCTGCTG----
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCTGCCCCCCG
TGCCTGCGYCMCCTT-
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGCCCCCCG
-GCCATCTGTT-----
 C G A T A C T G A T G C A G T C C G T A A C T G A T G C A G C T A T C G A G T C A G T C A T G C A G T C T A G C A T G C C T A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T