Information for 9-CCTSTCGGCT (Motif 17)

A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A T C G C G T A A T G C C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.832
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif54.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.3 +/- 26.3bp
Average Position of motif in Background42.3 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTSTCGGCT--
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTSTCGGCT--
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTSTCGGCT
--TGTCGGTT
 A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCTSTCGGCT---
-----NGGATTAN
 A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTSTCGGCT-
TCACCTCTGGGCAG
 A C G T A C G T A C G T A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTSTCGGCT--
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCTSTCGGCT-
------NGCTN
 A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTSTCGGCT------
CTACTAGGATGTNNTN
 A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCTSTCGGCT
-CTGTCTGG-
 A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTSTCGGCT
CCACCTGTTGCAT
 A C G T A C G T A C G T A G T C T G A C A C G T A T C G A C G T A T G C A C T G A C T G T G A C A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T