Information for 5-GGCCTCCTCCACGTGA (Motif 16)

A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A
Reverse Opposite:
A C G T A T G C C G T A A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C T A G C
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 12.5bp
Average Position of motif in Background73.1 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.68
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA-
-------KCCACGTGAC
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.67
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA
-------GCCACGTG-
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA
-------NCCACGTG-
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA
-------NVCACGTG-
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:GGCCTCCTCCACGTGA--
--------TCACGTGACC
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA-
-------ACCACGTGCC
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:GGCCTCCTCCACGTGA--
--------CCACGTGGNN
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:GGCCTCCTCCACGTGA
---------CACGTG-
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGCCTCCTCCACGTGA-
-------ACCACGTGCT
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:GGCCTCCTCCACGTGA-
---------CACGTGDC
 A C T G A C T G A G T C A G T C A C G T G T A C A G T C C G A T A G T C A G T C C G T A A G T C A C T G A C G T A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C