Information for 7-AGAAGRCAGCAGCACA (Motif 9)

C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
Reverse Opposite:
C A G T A T C G C G A T A T C G A G T C G C A T T A C G A G T C A G C T A T C G G A T C A G T C A G C T A C G T A T G C G A C T
p-value:1e-12
log p-value:-2.939e+01
Information Content per bp:1.639
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif190.7
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets44.5 +/- 20.3bp
Average Position of motif in Background50.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA
----GACAGCTGCAG-
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA
----AACAGCTGCAG-
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA-
--ADGGYAGYAGCATCT
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAAGRCAGCAGCACA
-NGNGACAGCTGCN--
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA
----AGCAGCTGCTNN
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA-
-ATTTACAGTAGCAAAA
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGAAGRCAGCAGCACA-
-------GGGAGGACNG
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAAGRCAGCAGCACA
----AGCAGCTGCT--
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA
-CAAGATGGCGGC---
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAAGRCAGCAGCACA
----AACAGCTG----
 C T G A A T C G G T C A C T G A C T A G C T A G T A G C C T G A A C T G A T G C C G T A C T A G A T G C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T