Information for 21-CWCTTTATTG (Motif 20)

G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A A C G T C T G A C G T A C G T A C T A G C G A T A C T G
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.887
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif74.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets56.4 +/- 21.1bp
Average Position of motif in Background55.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CWCTTTATTG-
-TTTTTATTGG
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CWCTTTATTG-
-NTTTTATTGG
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CWCTTTATTG-
-TTTTTATTGC
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CWCTTTATTG-
--TTTTATTGC
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CWCTTTATTG-
-NTTTTATTGG
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CWCTTTATTG----
NTNAATTTTATTGNATT
 A C G T A C G T A C G T G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CWCTTTATTG---
--TTTTATGGCTN
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CWCTTTATTG--
-NTTTTATTACN
 G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T A C G T
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CWCTTTATTG----
NNAATTTTATTGGNTN
 A C G T A C G T G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CWCTTTATTG----
NNANTTTTATTGGNNN
 A C G T A C G T G T A C C G T A G A T C A C G T A C G T A G C T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G