Information for 4-GCTAGCTTGCTGT (Motif 6)

A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C T A G A G T C C G T A C G T A A C T G G T A C A C G T C G T A A C T G A G T C
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 14.6bp
Average Position of motif in Background71.5 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT----
--NNTCCTGCTGTGNNN
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT----
--TNTCCTGCTGTGNNG
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT----
--TCNCCTGCTGNGNNN
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT-
----ACTTCCTGTT
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTAGCTTGCTGT--
-----CCTGCTGAGH
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCTAGCTTGCTGT-
--------GCTGTG
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT-
--CCCCCTGCTGTG
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT
---CACTTCCTGT
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTAGCTTGCTGT-------
---AGGACGCTGTAAAGGGA
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCTAGCTTGCTGT-
----ATTTCCTGTN
 A C T G A G T C A C G T G T C A A C T G A G T C C G A T C G A T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T