Information for 3-GTCTAGTBTAATD (Motif 4)

A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T
Reverse Opposite:
G C T A C G T A A C G T A C G T C G T A T A C G C T G A A G T C A G C T C G T A C T A G C G T A A T G C
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 25.0bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0103.1_Meox1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTCTAGTBTAATD-----
--CTGAGGTAATTACCNC
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

GSX2/MA0893.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTCTAGTBTAATD---
------NTTAATTAGN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

PH0174.1_Vax1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCTAGTBTAATD-----
--CTNNGNTAATTAACNT
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GTCTAGTBTAATD---
------NNTAATTANN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PDX1/MA0132.2/Jaspar

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GTCTAGTBTAATD--
-------CTAATTAN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GTCTAGTBTAATD--
-------NTAATTGN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

HOXB2/MA0902.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTCTAGTBTAATD---
------NNTAATTANN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTCTAGTBTAATD---
------NNTAATTAGN
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GTCTAGTBTAATD--
-------NTAATTGG
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GTCTAGTBTAATD--
-------TTAATTGG
 A T C G A C G T A G T C A C G T C T G A A C T G A G C T A G T C A C G T C G T A C G T A A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G