Information for 17-AATCACACACTAT (Motif 30)

C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
Reverse Opposite:
C T G A A C G T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G C G T A C G A T A C G T
p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 19.4bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATCACACACTAT-
AGCGGCACACACGCAA
 A C G T A C G T C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATCACACACTAT-
CGAAGCACACAAAATA
 A C G T A C G T C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATCACACACTAT
CAAATCACTG-----
 A C G T A C G T C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AATCACACACTAT
--TCACACCT---
 C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATCACACACTAT
-TTCACACCTT--
 C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATCACACACTAT
-TTMACACCTT--
 C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATCACACACTAT
NTTTTCACACCTT--
 A C G T A C G T C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATCACACACTAT
GGCCACACCCAN-
 C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATCACACACTAT
AAACCACAGAN---
 A C G T C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATCACACACTAT
--TCACACCT---
 C G T A G C T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C A G C T C G T A A G C T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T