Information for 14-AGGAGTGCCAAGA (Motif 24)

C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G C T A T C G A C T G A G T C C G T A A G T C A C G T A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 21.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGGAGTGCCAAGA
---GGTGCCAAGT
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGAGTGCCAAGA
CAAAGGCGTGGCCAG-
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGAGTGCCAAGA
---CGTGCCAAG-
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGGAGTGCCAAGA
----TTGCCAAG-
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGGAGTGCCAAGA
-----TGCCAA--
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGAGTGCCAAGA
AGGTGTGA-----
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTGCCAAGA
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGAGTGCCAAGA
AGGTGTGA-----
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTGCCAAGA
CTYRAGTGSY----
 A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGAGTGCCAAGA
TTGAGTGSTT---
 C G T A A C T G A C T G C G T A A C T G A C G T A C T G G T A C A T G C C T G A C G T A A C T G C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T