Information for 12-TTGAGGCTATTTA (Motif 22)

A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A G T C A G C T A G T C C G T A C T G A
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTGAGGCTATTTA----
-----GCTATTTTTGGM
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTATTTA----
-----KCTATTTTTRGH
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTGAGGCTATTTA----
-----GCTATTTTTAGC
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TTGAGGCTATTTA---
------CTATTTTTGG
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTATTTA----
-----GCTATTTATAGC
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTATTTA----
-----TCTATTTATAGN
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTGAGGCTATTTA------
----TTCTATTTTTAGNNN
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTATTTA----
-----TCTATTTTTAGA
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTGAGGCTATTTA-
------CTAATTAA
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTATTTA
-----NCTAATTA
 A G C T A C G T A C T G C T G A A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A