Information for 6-TAAGCCTTCA (Motif 24)

A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.623e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.8 +/- 9.9bp
Average Position of motif in Background68.9 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAAGCCTTCA
TAATCCCN--
 A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAGCCTTCA
NYTAATCCYB--
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAGCCTTCA
GCTAATCC----
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAGCCTTCA
CTTAATCCC---
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCTTCA
TTAATCCT---
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCTTCA
ATAATCCC---
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCTTCA
TTAATCCC---
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCCTTCA
CNAGGCCT---
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCTTCA
TTAATCCG---
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAGCCTTCA
CAAGCTT---
 A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T