p-value: | 1e-9 |
log p-value: | -2.110e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.8 +/- 21.8bp |
Average Position of motif in Background | 67.5 +/- 18.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | KAGTGWWTGYCAG- --NTGATTGACAGN |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | KAGTGWWTGYCAG- --BTGABTGACAGS |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | KAGTGWWTGYCAG-- ---TGAGTGACAGSC |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | KAGTGWWTGYCAG-- -------TGTCANYT |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | KAGTGWWTGYCAG- ------TTGACAGC |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | KAGTGWWTGYCAG- ------TTGCCAAG |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | KAGTGWWTGYCAG- ------YTGWCADY |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --KAGTGWWTGYCAG- NNGCGTGTGTGCNGCN |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | KAGTGWWTGYCAG-- -----VBTGWCAGCB |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --KAGTGWWTGYCAG TTRAGTGSYK----- |
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