Information for 17-TGGATTAGGAGCT (Motif 19)

A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.859e+00
Information Content per bp:1.965
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 21.1bp
Average Position of motif in Background57.3 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGATTAGGAGCT
-GGATTAGC----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGATTAGGAGCT
GGGATTANN----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGATTAGGAGCT
GGGATTAA-----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGATTAGGAGCT
NNGGATTAGN----
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGGATTAGGAGCT
TTGCCCGGATTAGG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGATTAGGAGCT
GNGGATTAGN----
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGATTAGGAGCT
VRGGATTARN----
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGATTAGGAGCT
RGGATTAR-----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGATTAGGAGCT
NGGATTAA-----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGATTAGGAGCT
CGGATTAN-----
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A C T A G A C T G C G T A A C T G A G T C A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T