Information for 13-GCGGAGCCTA (Motif 14)

C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
Reverse Opposite:
C A G T C T G A C T A G T C A G A G T C C A G T A G T C A G T C A C T G G A T C
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.733
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.19%
Number of Background Sequences with motif353.5
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets54.6 +/- 20.9bp
Average Position of motif in Background50.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCCTA
-CGGAGC---
 C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCCTA
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCGGAGCCTA
GGGGGCGGGGCC--
 A C G T A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCCTA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCCTA----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCCTA
AGGGGGCGGGGCTG-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGGAGCCTA
---CAGCC--
 C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGAGCCTA
AGCGCGCC--
 C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCGGAGCCTA
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAGCCTA
NCGCGGACGTTG
 A C G T A C G T C T A G A G T C T C A G C T A G G T C A A C T G A G T C A G T C G A C T G T C A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G