Information for 1-NNNSYCCCHDGGGRSN (Motif 1)

G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
Reverse Opposite:
C T A G A T C G A G T C A G T C G A T C G A T C G A C T C T G A C T A G C T A G A T C G T C G A T A G C A G T C G A T C C T A G
p-value:1e-79
log p-value:-1.821e+02
Information Content per bp:1.515
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif25.89%
Number of Background Sequences with motif2661.2
Percentage of Background Sequences with motif5.54%
Average Position of motif in Targets52.6 +/- 22.5bp
Average Position of motif in Background49.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NNNSYCCCHDGGGRSN
--NGTCCCNNGGGA--
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
--ANTCCCTNGGGAAT
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.86
Offset:4
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
----TCCCCTGGGGAC
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
-ACCCCCCCGGGGGGN
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
--CCCCCCCGGGGGNN
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:NNNSYCCCHDGGGRSN
---TGCCCTGAGGGCA
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
---TGCCCNNAGGGCA
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:NNNSYCCCHDGGGRSN
-NCCCCCCCGGGGGGN
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.72
Offset:3
Orientation:forward strand
Alignment:NNNSYCCCHDGGGRSN
---TGCCCTGAGGGCA
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:NNNSYCCCHDGGGRSN-
--ATTCCCTGAGGGGAA
 G A T C C T A G T C A G A T C G A G C T A T G C G A T C A G T C G A C T C T G A C T A G C T A G T A C G T C A G T A G C G A T C A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A