Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 744)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47535)	% of Background Sequences with Motif
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-345	-7.963e+02	0.0000	311.0	41.80%	746.3	1.57%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-321	-7.401e+02	0.0000	365.0	49.06%	1592.6	3.35%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-180	-4.149e+02	0.0000	294.0	39.52%	2314.5	4.88%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-174	-4.023e+02	0.0000	328.0	44.09%	3247.0	6.84%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-135	-3.113e+02	0.0000	321.0	43.15%	4216.2	8.88%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-124	-2.870e+02	0.0000	237.0	31.85%	2230.9	4.70%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-121	-2.801e+02	0.0000	278.0	37.37%	3388.7	7.14%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-121	-2.792e+02	0.0000	260.0	34.95%	2900.4	6.11%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-117	-2.699e+02	0.0000	303.0	40.73%	4303.8	9.07%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-113	-2.608e+02	0.0000	326.0	43.82%	5238.9	11.04%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-105	-2.436e+02	0.0000	239.0	32.12%	2799.0	5.90%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-79	-1.821e+02	0.0000	125.0	16.80%	837.5	1.76%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-61	-1.409e+02	0.0000	112.0	15.05%	930.8	1.96%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-59	-1.365e+02	0.0000	135.0	18.15%	1502.9	3.17%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-53	-1.234e+02	0.0000	150.0	20.16%	2106.7	4.44%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-47	-1.104e+02	0.0000	211.0	28.36%	4478.7	9.43%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-43	-9.990e+01	0.0000	54.0	7.26%	232.9	0.49%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-30	-6.970e+01	0.0000	79.0	10.62%	1007.4	2.12%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-29	-6.689e+01	0.0000	62.0	8.33%	625.4	1.32%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-22	-5.241e+01	0.0000	87.0	11.69%	1586.7	3.34%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-18	-4.236e+01	0.0000	108.0	14.52%	2665.7	5.62%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-14	-3.443e+01	0.0000	72.0	9.68%	1561.3	3.29%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-13	-3.091e+01	0.0000	68.0	9.14%	1527.1	3.22%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-10	-2.331e+01	0.0000	151.0	20.30%	5688.7	11.98%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-6	-1.469e+01	0.0000	36.0	4.84%	889.8	1.87%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-6	-1.387e+01	0.0000	246.0	33.06%	11961.1	25.20%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-4	-1.136e+01	0.0002	21.0	2.82%	444.4	0.94%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-4	-9.473e+00	0.0010	12.0	1.61%	194.4	0.41%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-3	-7.829e+00	0.0050	15.0	2.02%	339.8	0.72%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-3	-7.790e+00	0.0050	41.0	5.51%	1479.7	3.12%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-3	-7.365e+00	0.0074	32.0	4.30%	1084.6	2.28%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-3	-7.274e+00	0.0079	51.0	6.85%	2016.1	4.25%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-2	-6.520e+00	0.0163	15.0	2.02%	387.3	0.82%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-2	-6.350e+00	0.0187	8.0	1.08%	138.6	0.29%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-2	-6.301e+00	0.0191	13.0	1.75%	317.3	0.67%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-2	-5.961e+00	0.0260	19.0	2.55%	581.3	1.22%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-2	-5.679e+00	0.0336	31.0	4.17%	1160.7	2.44%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-2	-5.676e+00	0.0336	16.0	2.15%	466.2	0.98%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-2	-5.505e+00	0.0380	17.0	2.28%	518.3	1.09%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-2	-5.434e+00	0.0397	27.0	3.63%	985.2	2.08%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-5.373e+00	0.0412	33.0	4.44%	1285.7	2.71%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-5.193e+00	0.0481	32.0	4.30%	1252.0	2.64%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-2	-5.134e+00	0.0499	57.0	7.66%	2566.3	5.41%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-2	-4.908e+00	0.0611	35.0	4.70%	1430.6	3.01%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e-2	-4.897e+00	0.0611	3.0	0.40%	25.4	0.05%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-2	-4.876e+00	0.0611	15.0	2.02%	464.1	0.98%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-2	-4.748e+00	0.0672	65.0	8.74%	3058.9	6.44%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-4.741e+00	0.0672	57.0	7.66%	2619.0	5.52%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-2	-4.689e+00	0.0683	55.0	7.39%	2517.3	5.30%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-4.533e+00	0.0783	6.0	0.81%	116.8	0.25%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-1	-4.486e+00	0.0804	9.0	1.21%	229.8	0.48%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-1	-4.462e+00	0.0807	22.0	2.96%	818.4	1.72%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-1	-4.224e+00	0.1005	36.0	4.84%	1555.4	3.28%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-4.213e+00	0.1005	27.0	3.63%	1089.5	2.30%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-4.205e+00	0.1005	26.0	3.49%	1039.3	2.19%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-4.162e+00	0.1012	52.0	6.99%	2428.0	5.11%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-4.128e+00	0.1029	50.0	6.72%	2322.9	4.89%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-4.121e+00	0.1029	37.0	4.97%	1620.3	3.41%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-1	-4.115e+00	0.1029	32.0	4.30%	1357.0	2.86%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-3.987e+00	0.1126	80.0	10.75%	4033.5	8.50%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-1	-3.773e+00	0.1371	23.0	3.09%	927.5	1.95%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-1	-3.716e+00	0.1428	5.0	0.67%	103.1	0.22%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-3.642e+00	0.1514	47.0	6.32%	2228.7	4.69%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-3.540e+00	0.1650	4.0	0.54%	73.1	0.15%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-1	-3.536e+00	0.1650	57.0	7.66%	2805.5	5.91%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-1	-3.525e+00	0.1650	12.0	1.61%	407.1	0.86%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-1	-3.487e+00	0.1662	7.0	0.94%	188.3	0.40%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-3.221e+00	0.2136	10.0	1.34%	333.4	0.70%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.217e+00	0.2136	55.0	7.39%	2748.3	5.79%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-1	-3.196e+00	0.2136	8.0	1.08%	244.3	0.51%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-3.143e+00	0.2212	7.0	0.94%	203.1	0.43%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-3.110e+00	0.2255	26.0	3.49%	1154.3	2.43%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-1	-3.083e+00	0.2285	136.0	18.28%	7559.1	15.92%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-3.077e+00	0.2285	15.0	2.02%	585.2	1.23%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-1	-3.059e+00	0.2285	10.0	1.34%	343.9	0.72%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-3.019e+00	0.2339	6.0	0.81%	166.6	0.35%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-1	-2.964e+00	0.2441	84.0	11.29%	4485.3	9.45%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-1	-2.934e+00	0.2482	46.0	6.18%	2287.7	4.82%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-2.911e+00	0.2507	28.0	3.76%	1287.7	2.71%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-1	-2.879e+00	0.2558	65.0	8.74%	3391.7	7.14%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-2.874e+00	0.2558	10.0	1.34%	355.8	0.75%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-2.827e+00	0.2627	30.0	4.03%	1408.0	2.97%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.777e+00	0.2728	24.0	3.23%	1087.1	2.29%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-1	-2.746e+00	0.2782	22.0	2.96%	983.4	2.07%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-1	-2.709e+00	0.2851	55.0	7.39%	2846.8	6.00%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-1	-2.679e+00	0.2904	22.0	2.96%	991.6	2.09%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-2.604e+00	0.3096	121.0	16.26%	6799.2	14.32%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-1	-2.488e+00	0.3435	14.0	1.88%	587.4	1.24%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-2.461e+00	0.3490	42.0	5.65%	2145.3	4.52%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-1	-2.455e+00	0.3490	2.0	0.27%	31.3	0.07%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.313e+00	0.3960	11.0	1.48%	448.8	0.95%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-1	-2.308e+00	0.3960	38.0	5.11%	1944.2	4.10%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.265e+00	0.4062	18.0	2.42%	825.5	1.74%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.233e+00	0.4150	18.0	2.42%	829.8	1.75%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.205e+00	0.4223	14.0	1.88%	616.5	1.30%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-2.201e+00	0.4223	8.0	1.08%	305.3	0.64%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-2.184e+00	0.4223	26.0	3.49%	1281.7	2.70%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.179e+00	0.4223	39.0	5.24%	2027.4	4.27%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-2.147e+00	0.4297	59.0	7.93%	3209.3	6.76%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.128e+00	0.4297	4.0	0.54%	119.5	0.25%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.128e+00	0.4297	4.0	0.54%	119.5	0.25%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.117e+00	0.4297	41.0	5.51%	2156.3	4.54%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.106e+00	0.4303	4.0	0.54%	120.5	0.25%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.069e+00	0.4422	25.0	3.36%	1243.8	2.62%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-2.041e+00	0.4501	31.0	4.17%	1591.1	3.35%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-2.026e+00	0.4528	9.0	1.21%	370.7	0.78%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.017e+00	0.4528	28.0	3.76%	1423.1	3.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-2.000e+00	0.4561	4.0	0.54%	125.9	0.27%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.985e+00	0.4587	23.0	3.09%	1143.7	2.41%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.971e+00	0.4611	3.0	0.40%	82.3	0.17%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.956e+00	0.4638	88.0	11.83%	5008.3	10.55%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.920e+00	0.4766	19.0	2.55%	927.1	1.95%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.896e+00	0.4837	20.0	2.69%	987.7	2.08%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.886e+00	0.4845	6.0	0.81%	228.8	0.48%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.885e+00	0.4845	25.0	3.36%	1274.1	2.68%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.878e+00	0.4845	8.0	1.08%	331.0	0.70%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.855e+00	0.4869	31.0	4.17%	1627.5	3.43%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.850e+00	0.4869	18.0	2.42%	881.2	1.86%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-1.848e+00	0.4869	3.0	0.40%	88.0	0.19%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.843e+00	0.4869	1.0	0.13%	11.4	0.02%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.784e+00	0.5054	14.0	1.88%	667.0	1.40%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.767e+00	0.5099	61.0	8.20%	3433.3	7.23%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.762e+00	0.5099	16.0	2.15%	781.4	1.65%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.758e+00	0.5099	80.0	10.75%	4588.9	9.67%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.728e+00	0.5172	42.0	5.65%	2304.3	4.85%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.716e+00	0.5194	14.0	1.88%	675.9	1.42%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.705e+00	0.5212	72.0	9.68%	4119.6	8.68%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.692e+00	0.5235	18.0	2.42%	905.4	1.91%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.691e+00	0.5235	1.0	0.13%	13.4	0.03%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.675e+00	0.5246	44.0	5.91%	2437.4	5.13%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.645e+00	0.5364	31.0	4.17%	1671.4	3.52%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.636e+00	0.5373	4.0	0.54%	145.1	0.31%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.627e+00	0.5381	5.0	0.67%	196.0	0.41%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.554e+00	0.5742	46.0	6.18%	2590.7	5.46%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.546e+00	0.5744	13.0	1.75%	642.5	1.35%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.534e+00	0.5774	23.0	3.09%	1223.5	2.58%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.498e+00	0.5938	24.0	3.23%	1289.6	2.72%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.495e+00	0.5938	5.0	0.67%	206.4	0.43%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.484e+00	0.5938	69.0	9.27%	4012.1	8.45%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.477e+00	0.5939	73.0	9.81%	4260.3	8.97%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.474e+00	0.5939	10.0	1.34%	482.3	1.02%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.425e+00	0.6163	31.0	4.17%	1722.8	3.63%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.401e+00	0.6274	7.0	0.94%	323.8	0.68%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.398e+00	0.6274	28.0	3.76%	1549.4	3.26%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.377e+00	0.6334	31.0	4.17%	1734.5	3.65%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.368e+00	0.6351	9.0	1.21%	439.9	0.93%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.337e+00	0.6503	45.0	6.05%	2595.0	5.47%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.334e+00	0.6503	11.0	1.48%	558.4	1.18%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.330e+00	0.6503	5.0	0.67%	220.9	0.47%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.269e+00	0.6821	41.0	5.51%	2371.0	4.99%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.266e+00	0.6821	14.0	1.88%	744.2	1.57%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.232e+00	0.6988	60.0	8.06%	3552.5	7.48%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.204e+00	0.7135	2.0	0.27%	70.6	0.15%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.203e+00	0.7135	60.0	8.06%	3563.6	7.51%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.196e+00	0.7135	8.0	1.08%	404.3	0.85%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.173e+00	0.7221	10.0	1.34%	524.9	1.11%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.149e+00	0.7352	2.0	0.27%	73.6	0.15%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.141e+00	0.7364	4.0	0.54%	182.5	0.38%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-1.133e+00	0.7376	12.0	1.61%	649.2	1.37%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.123e+00	0.7397	30.0	4.03%	1743.0	3.67%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.123e+00	0.7397	8.0	1.08%	414.8	0.87%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.110e+00	0.7404	104.0	13.98%	6349.1	13.37%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.109e+00	0.7404	29.0	3.90%	1685.3	3.55%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.108e+00	0.7404	55.0	7.39%	3292.0	6.93%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.088e+00	0.7430	18.0	2.42%	1019.3	2.15%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.082e+00	0.7434	8.0	1.08%	420.5	0.89%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.054e+00	0.7595	17.0	2.28%	966.9	2.04%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.051e+00	0.7595	22.0	2.96%	1272.1	2.68%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.039e+00	0.7619	7.0	0.94%	367.7	0.77%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.027e+00	0.7669	5.0	0.67%	251.0	0.53%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.022e+00	0.7669	13.0	1.75%	730.8	1.54%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.017e+00	0.7669	13.0	1.75%	731.5	1.54%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.017e+00	0.7669	11.0	1.48%	610.2	1.29%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.012e+00	0.7669	18.0	2.42%	1037.6	2.19%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-9.997e-01	0.7669	2.0	0.27%	82.7	0.17%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-9.899e-01	0.7686	8.0	1.08%	434.8	0.92%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-9.771e-01	0.7741	30.0	4.03%	1787.3	3.76%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.566e-01	0.7856	3.0	0.40%	142.6	0.30%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-9.445e-01	0.7908	5.0	0.67%	261.4	0.55%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-9.425e-01	0.7908	14.0	1.88%	808.0	1.70%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-9.367e-01	0.7908	5.0	0.67%	262.7	0.55%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-9.333e-01	0.7908	9.0	1.21%	504.0	1.06%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-9.329e-01	0.7908	4.0	0.54%	203.3	0.43%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-9.229e-01	0.7908	59.0	7.93%	3621.4	7.63%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-9.132e-01	0.7908	21.0	2.82%	1248.3	2.63%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-8.794e-01	0.8122	40.0	5.38%	2447.3	5.16%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-8.681e-01	0.8171	6.0	0.81%	332.8	0.70%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-8.673e-01	0.8171	60.0	8.06%	3711.3	7.82%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-8.503e-01	0.8229	75.0	10.08%	4667.4	9.83%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-8.453e-01	0.8229	17.0	2.28%	1018.9	2.15%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-8.451e-01	0.8229	19.0	2.55%	1144.0	2.41%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-8.441e-01	0.8229	54.0	7.26%	3344.2	7.04%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-8.416e-01	0.8229	19.0	2.55%	1144.8	2.41%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-8.356e-01	0.8229	147.0	19.76%	9239.6	19.46%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-8.324e-01	0.8229	9.0	1.21%	523.4	1.10%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-8.274e-01	0.8229	53.0	7.12%	3289.2	6.93%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-8.161e-01	0.8229	3.0	0.40%	156.4	0.33%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-7.971e-01	0.8284	22.0	2.96%	1346.7	2.84%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-7.791e-01	0.8392	5.0	0.67%	284.5	0.60%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-7.673e-01	0.8450	13.0	1.75%	788.4	1.66%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-7.635e-01	0.8450	11.0	1.48%	663.9	1.40%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-7.514e-01	0.8500	21.0	2.82%	1298.7	2.74%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-7.398e-01	0.8557	50.0	6.72%	3143.3	6.62%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-7.376e-01	0.8557	3.0	0.40%	165.9	0.35%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-7.376e-01	0.8557	3.0	0.40%	165.1	0.35%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-7.236e-01	0.8570	14.0	1.88%	863.7	1.82%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-7.020e-01	0.8714	21.0	2.82%	1315.4	2.77%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-6.964e-01	0.8721	1.0	0.13%	44.9	0.09%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-6.950e-01	0.8721	7.0	0.94%	425.9	0.90%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.771e-01	0.8807	80.0	10.75%	5092.2	10.73%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-6.755e-01	0.8807	37.0	4.97%	2347.9	4.95%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-6.658e-01	0.8823	1.0	0.13%	46.9	0.10%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-6.595e-01	0.8837	3.0	0.40%	175.2	0.37%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-6.568e-01	0.8837	7.0	0.94%	433.8	0.91%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-6.551e-01	0.8837	6.0	0.81%	369.9	0.78%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-6.463e-01	0.8837	2.0	0.27%	113.0	0.24%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-6.436e-01	0.8837	4.0	0.54%	242.0	0.51%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-6.375e-01	0.8837	4.0	0.54%	243.4	0.51%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-6.142e-01	0.8993	14.0	1.88%	896.3	1.89%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-6.122e-01	0.8993	62.0	8.33%	3984.7	8.39%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-6.099e-01	0.8993	1.0	0.13%	50.5	0.11%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.078e-01	0.8993	8.0	1.08%	509.4	1.07%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-6.001e-01	0.8993	11.0	1.48%	706.9	1.49%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-5.994e-01	0.8993	13.0	1.75%	836.9	1.76%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-5.918e-01	0.8993	83.0	11.16%	5346.8	11.26%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-5.843e-01	0.8993	24.0	3.23%	1554.4	3.27%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-5.800e-01	0.8993	8.0	1.08%	516.9	1.09%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-5.746e-01	0.8993	6.0	0.81%	386.6	0.81%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-5.702e-01	0.8993	29.0	3.90%	1884.1	3.97%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-5.600e-01	0.9040	1.0	0.13%	54.4	0.11%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-5.486e-01	0.9104	10.0	1.34%	656.7	1.38%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.442e-01	0.9104	6.0	0.81%	393.6	0.83%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-5.393e-01	0.9110	2.0	0.27%	125.4	0.26%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-5.379e-01	0.9110	127.0	17.07%	8218.1	17.31%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-5.342e-01	0.9110	20.0	2.69%	1316.5	2.77%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.323e-01	0.9110	100.0	13.44%	6488.0	13.67%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-5.175e-01	0.9154	2.0	0.27%	128.8	0.27%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-5.172e-01	0.9154	29.0	3.90%	1911.8	4.03%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-5.153e-01	0.9154	6.0	0.81%	400.2	0.84%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-5.080e-01	0.9154	23.0	3.09%	1524.8	3.21%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-5.056e-01	0.9154	12.0	1.61%	802.0	1.69%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.049e-01	0.9154	81.0	10.89%	5288.0	11.14%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.991e-01	0.9154	11.0	1.48%	739.0	1.56%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-4.899e-01	0.9154	2.0	0.27%	133.0	0.28%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-4.898e-01	0.9154	8.0	1.08%	541.8	1.14%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-4.877e-01	0.9154	29.0	3.90%	1927.9	4.06%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-4.767e-01	0.9154	2.0	0.27%	134.2	0.28%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-4.734e-01	0.9154	8.0	1.08%	546.4	1.15%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-4.721e-01	0.9154	26.0	3.49%	1739.2	3.66%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-4.675e-01	0.9154	3.0	0.40%	206.5	0.44%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-4.639e-01	0.9154	2.0	0.27%	136.8	0.29%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-4.450e-01	0.9256	8.0	1.08%	555.7	1.17%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.431e-01	0.9256	70.0	9.41%	4630.1	9.75%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-4.387e-01	0.9256	21.0	2.82%	1427.9	3.01%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-4.353e-01	0.9256	7.0	0.94%	490.3	1.03%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-4.349e-01	0.9256	21.0	2.82%	1429.0	3.01%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-4.303e-01	0.9256	1.0	0.13%	67.3	0.14%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.279e-01	0.9256	3.0	0.40%	214.6	0.45%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-4.199e-01	0.9256	21.0	2.82%	1437.3	3.03%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-4.066e-01	0.9323	17.0	2.28%	1177.0	2.48%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-4.065e-01	0.9323	16.0	2.15%	1110.9	2.34%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-3.841e-01	0.9462	21.0	2.82%	1457.9	3.07%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.681e-01	0.9578	19.0	2.55%	1332.2	2.81%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-3.642e-01	0.9580	5.0	0.67%	373.7	0.79%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-3.618e-01	0.9580	1.0	0.13%	76.5	0.16%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-3.543e-01	0.9602	2.0	0.27%	156.7	0.33%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.467e-01	0.9638	3.0	0.40%	233.1	0.49%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-3.462e-01	0.9638	25.0	3.36%	1749.4	3.69%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-3.449e-01	0.9638	2.0	0.27%	158.7	0.33%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-3.449e-01	0.9638	2.0	0.27%	158.9	0.33%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-3.399e-01	0.9638	16.0	2.15%	1145.2	2.41%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-3.356e-01	0.9638	1.0	0.13%	80.3	0.17%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-3.280e-01	0.9638	11.0	1.48%	809.0	1.70%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-3.226e-01	0.9638	26.0	3.49%	1833.7	3.86%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-3.207e-01	0.9638	12.0	1.61%	881.4	1.86%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-3.175e-01	0.9638	1.0	0.13%	83.5	0.18%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.159e-01	0.9638	4.0	0.54%	316.2	0.67%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-3.145e-01	0.9638	26.0	3.49%	1839.8	3.88%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-3.123e-01	0.9638	23.0	3.09%	1638.0	3.45%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-3.109e-01	0.9638	5.0	0.67%	391.9	0.83%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-3.044e-01	0.9638	47.0	6.32%	3252.1	6.85%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.006e-01	0.9638	10.0	1.34%	752.4	1.58%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.976e-01	0.9638	74.0	9.95%	5044.6	10.63%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.950e-01	0.9638	1.0	0.13%	87.2	0.18%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-2.827e-01	0.9638	6.0	0.81%	476.0	1.00%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-2.696e-01	0.9720	16.0	2.15%	1189.9	2.51%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.694e-01	0.9720	1.0	0.13%	92.4	0.19%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-2.656e-01	0.9720	48.0	6.45%	3360.8	7.08%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.621e-01	0.9720	48.0	6.45%	3364.3	7.09%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-2.596e-01	0.9720	4.0	0.54%	336.9	0.71%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.588e-01	0.9720	47.0	6.32%	3301.1	6.95%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.558e-01	0.9720	23.0	3.09%	1682.4	3.54%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.534e-01	0.9720	17.0	2.28%	1270.2	2.68%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.519e-01	0.9720	47.0	6.32%	3309.0	6.97%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.507e-01	0.9720	7.0	0.94%	563.6	1.19%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.507e-01	0.9720	79.0	10.62%	5437.3	11.45%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.333e-01	0.9720	11.0	1.48%	862.5	1.82%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.309e-01	0.9720	12.0	1.61%	935.6	1.97%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.224e-01	0.9746	12.0	1.61%	941.9	1.98%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.196e-01	0.9746	2.0	0.27%	192.7	0.41%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.186e-01	0.9746	21.0	2.82%	1577.1	3.32%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-2.102e-01	0.9768	1.0	0.13%	106.1	0.22%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.039e-01	0.9797	5.0	0.67%	438.4	0.92%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.960e-01	0.9842	1.0	0.13%	110.8	0.23%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.803e-01	0.9965	29.0	3.90%	2173.3	4.58%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.775e-01	0.9965	3.0	0.40%	293.1	0.62%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.614e-01	1.0000	40.0	5.38%	2957.6	6.23%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.563e-01	1.0000	104.0	13.98%	7267.6	15.31%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.547e-01	1.0000	13.0	1.75%	1071.9	2.26%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.498e-01	1.0000	4.0	0.54%	391.5	0.82%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.497e-01	1.0000	34.0	4.57%	2562.9	5.40%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.460e-01	1.0000	2.0	0.27%	223.9	0.47%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.453e-01	1.0000	8.0	1.08%	708.3	1.49%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.383e-01	1.0000	146.0	19.62%	10087.1	21.25%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.345e-01	1.0000	18.0	2.42%	1457.1	3.07%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.292e-01	1.0000	16.0	2.15%	1319.8	2.78%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.268e-01	1.0000	13.0	1.75%	1102.4	2.32%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.167e-01	1.0000	2.0	0.27%	240.1	0.51%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.050e-01	1.0000	69.0	9.27%	5054.5	10.65%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.001e-01	1.0000	17.0	2.28%	1436.0	3.02%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-9.569e-02	1.0000	2.0	0.27%	255.2	0.54%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-8.845e-02	1.0000	4.0	0.54%	442.8	0.93%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-8.583e-02	1.0000	16.0	2.15%	1386.9	2.92%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-7.742e-02	1.0000	44.0	5.91%	3414.5	7.19%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-6.535e-02	1.0000	3.0	0.40%	380.2	0.80%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-6.307e-02	1.0000	20.0	2.69%	1734.1	3.65%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-5.678e-02	1.0000	138.0	18.55%	9892.1	20.84%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-5.609e-02	1.0000	8.0	1.08%	825.7	1.74%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-5.029e-02	1.0000	143.0	19.22%	10267.4	21.63%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-5.028e-02	1.0000	1.0	0.13%	192.5	0.41%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-4.249e-02	1.0000	2.0	0.27%	316.5	0.67%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-4.107e-02	1.0000	13.0	1.75%	1265.8	2.67%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-4.020e-02	1.0000	24.0	3.23%	2108.8	4.44%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-3.974e-02	1.0000	2.0	0.27%	321.7	0.68%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-3.655e-02	1.0000	3.0	0.40%	429.2	0.90%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-3.553e-02	1.0000	58.0	7.80%	4580.3	9.65%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.840e-02	1.0000	4.0	0.54%	547.9	1.15%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.895e-02	1.0000	1.0	0.13%	253.3	0.53%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.788e-02	1.0000	48.0	6.45%	4018.4	8.46%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.323e-02	1.0000	2.0	0.27%	402.2	0.85%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-7.426e-03	1.0000	8.0	1.08%	1046.9	2.21%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-7.152e-03	1.0000	3.0	0.40%	561.2	1.18%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.193e-03	1.0000	17.0	2.28%	1966.1	4.14%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.959e-03	1.0000	8.0	1.08%	1178.7	2.48%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-6.110e-04	1.0000	44.0	5.91%	4304.4	9.07%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.560e-04	1.0000	35.0	4.70%	3720.6	7.84%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-9.000e-06	1.0000	7.0	0.94%	1544.5	3.25%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.000e-06	1.0000	27.0	3.63%	3558.4	7.50%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-0.000e+00	1.0000	30.0	4.03%	4143.7	8.73%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	64.4	0.14%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	0.000e+00	1.0000	0.0	0.00%	113.6	0.24%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	25.1	0.05%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	51.2	0.11%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	17.0	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	0.01%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	25.6	0.05%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	16.3	0.03%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	21.8	0.05%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	54.1	0.11%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	38.1	0.08%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	0.000e+00	1.0000	0.0	0.00%	122.9	0.26%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	7.0	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	20.4	0.04%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	165.9	0.35%