Information for 20-GTGCTGTGCACTA (Motif 28)

A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 31.1bp
Average Position of motif in Background27.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGCACTA
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGCACTA
NNTCCTGCTGTGNNN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGCTGTGCACTA---
NNGTATGTGCACATNNN
 A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGCTGTGCACTA
--GCTGTG-----
 A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGCTGTGCACTA----
TACATGTGCACATAAAA
 A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGCACTA
TNTCCTGCTGTGNNG--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGCTGTGCACTA----
NNNNTGAGCACTGTNNG
 A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGCACTA
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGCACTA
TCNCCTGCTGNGNNN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGCTGTGCACTA----
-GGGTGTGCCCAAAAGG
 A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G