Information for 8-AGCCAATNGG (Motif 5)

G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
Reverse Opposite:
T A G C A G T C A T G C G T C A A G C T A G C T A C T G A T C G A G T C C A G T
p-value:1e-15
log p-value:-3.564e+01
Information Content per bp:1.705
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif336.5
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets52.6 +/- 24.2bp
Average Position of motif in Background48.0 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AGCCAATNGG
AGCCAATCGG
 G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATNGG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATNGG
ACTAGCCAATCA-
 A C G T A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATNGG------
TGGACCAATCAGCACTCT
 A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0089.1_Isx/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATNGG----
ACNNCTAATTAGNNNN
 A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G A C G T A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCCAATNGG
TGCCAA----
 G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCCAATNGG
GAACAATGG-
 G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAATNGG----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCAATNGG-----
AAAGTAATTAGTGAAT
 A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATNGG
CGTGCCAAG---
 A C G T A C G T G T C A C T A G A T G C G T A C C T G A C T G A C A G T T A C G T C A G A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T