Information for 20-ARGGGAAATGTCA (Motif 17)

C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
Reverse Opposite:
C G A T C A T G G C T A A G T C G C T A A C G T A G C T A C G T A G T C G T A C A G T C A G T C A G C T
p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.700
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.3 +/- 19.7bp
Average Position of motif in Background41.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ARGGGAAATGTCA
TAGGGCAAAGGTCA
 A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ARGGGAAATGTCA
GGAGGGGGAA-----
 A C G T A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ARGGGAAATGTCA
GTAGGGCAAAGGTCA
 A C G T A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ARGGGAAATGTCA
AAAGRGGAAGTG---
 A C G T A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ARGGGAAATGTCA
-ANGNAAAGGTCA
 C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ARGGGAAATGTCA
TGGGGCAAAGGTCA
 A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARGGGAAATGTCA
AGAGGAA------
 C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARGGGAAATGTCA
TGGGGA-------
 C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ARGGGAAATGTCA
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ARGGGAAATGTCA
NATGGAAAAN----
 A C G T C T G A C T A G A C T G A C T G C T A G G T C A T C G A T G C A C G A T T C A G C A G T G T A C G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T