Information for 11-WTCTCTTSMATWG (Motif 17)

C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G C T A C G T A T G C C G T A C G T A A C T G C G T A A T C G C G T A C G T A
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 26.6bp
Average Position of motif in Background37.5 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WTCTCTTSMATWG---
NNNTATTGAATTGNNN
 C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WTCTCTTSMATWG
TKCTGTTCCA---
 C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--WTCTCTTSMATWG
ANTTCTCAGGAANNN
 A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:WTCTCTTSMATWG-----
---NNATNAATTGTTTNN
 C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-WTCTCTTSMATWG
NNTNTCATGAATGT
 A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--WTCTCTTSMATWG-
AAACCTCGTAAAATTT
 A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--WTCTCTTSMATWG
GTTTCACTTCCG---
 A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--WTCTCTTSMATWG-
AAAGCTCGTAAAATTT
 A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---WTCTCTTSMATWG
ACTTTCACTTTC----
 A C G T A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---WTCTCTTSMATWG
ASTTTCACTTCC----
 A C G T A C G T A C G T C G A T A C G T A T G C A C G T A G T C C G A T A C G T A T C G G T C A C T G A A C G T C G A T A C T G
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T A C G T