Information for 4-KGTGMCMAGYCAG (Motif 5)

A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C G T C A
p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 32.6bp
Average Position of motif in Background49.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KGTGMCMAGYCAG
--TGCCCAGNHW-
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KGTGMCMAGYCAG
GGTGCCAAGT---
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KGTGMCMAGYCAG
-ATGCCCACC---
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:KGTGMCMAGYCAG
-----CCAGACAG
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KGTGMCMAGYCAG--
-GTGCCACGTCATCA
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

XBP1/MA0844.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:KGTGMCMAGYCAG-
AATGCCACGTCATC
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KGTGMCMAGYCAG--
-ATGCCACGTCATCA
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KGTGMCMAGYCAG
-TTGCCAAG----
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---KGTGMCMAGYCAG
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KGTGMCMAGYCAG-
--GGACCACCCACG
 A C G T A C T G C G A T A C T G G T C A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G