Information for 12-GCGAGGCCGY (Motif 13)

A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C
Reverse Opposite:
C T A G A G T C A C T G A C T G A G T C A T G C A G C T A G T C A T C G A T G C
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.796
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif126.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets62.7 +/- 26.7bp
Average Position of motif in Background52.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCGAGGCCGY
-CTAGGCCT-
 A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGGCCGY--
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGAGGCCGY
TGCGTGGGCGT
 A C G T A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGGCCGY--
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCGAGGCCGY
-CNAGGCCT-
 A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGAGGCCGY------
--CAGGCCNNGGCCNN
 A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGAGGCCGY--
NCGCGGACGTTG
 A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGGCCGY-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGGCCGY
GGGGGCGGGGCC--
 A C G T A C G T A C G T A C G T A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGAGGCCGY-
-CAAGGHCANV
 A T C G A T G C T C A G C T G A A T C G A C T G G T A C G T A C A C T G A G T C A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G