Information for 24-AACAGTKAGTTTC (Motif 34)

C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C
Reverse Opposite:
C T A G C T G A C G T A G T C A T G A C G A C T G T A C G C T A T A G C C G A T A C T G C G A T C G A T
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.697
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif99.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets48.4 +/- 32.3bp
Average Position of motif in Background47.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AACAGTKAGTTTC-
GAACADWATGTTCTT
 A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AACAGTKAGTTTC-
GVACAGNMTGTYCTB
 A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACAGTKAGTTTC-
GRACAGWMTGTYCTB
 A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AACAGTKAGTTTC
NAGAACAGNCTGTNCT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

NR3C2/MA0727.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AACAGTKAGTTTC-
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AACAGTKAGTTTC-------
-----TNAGTTTCGATTTTN
 C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AACAGTKAGTTTC
NAGNACANNNTGTNCT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACAGTKAGTTTC
AACAGGAAGT---
 C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AACAGTKAGTTTC-
NGGAACATNATGTACCC
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AACAGTKAGTTTC-
GGGAACACGGTGTACCC
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C T G C T G A A C T G A C G T C G A T G A C T A G T C A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C