Information for 5-ATTRTTCMAT (Motif 15)

C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T
Reverse Opposite:
G T C A C A G T A C G T C T A G G T C A C T G A G A T C G T C A T G C A G A C T
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.711
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif225.7
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets41.1 +/- 27.8bp
Average Position of motif in Background49.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATTRTTCMAT
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----ATTRTTCMAT-
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ATTRTTCMAT-
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTRTTCMAT
NATTGTGCAAT
 A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ATTRTTCMAT--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATTRTTCMAT--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTRTTCMAT-
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATTRTTCMAT-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.64
Offset:-9
Orientation:reverse strand
Alignment:---------ATTRTTCMAT---
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTRTTCMAT-------
ATGGTTCAATAATTTTG
 C T G A A C G T A C G T C T A G A G C T A C G T G A T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G