Information for 14-GTGSAKATCA (Motif 21)

A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A
Reverse Opposite:
C G A T T C A G C G T A A G C T T G C A C G A T T A G C A G T C C G T A T A G C
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.661
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.55%
Number of Background Sequences with motif1100.3
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets58.8 +/- 27.1bp
Average Position of motif in Background49.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGSAKATCA
GTGGAT----
 A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGSAKATCA-
SCTGTCAVTCAV
 A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGSAKATCA---
TAGTGATCATCATTA
 A C G T A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGSAKATCA-----
AATAGGGTATCATATAT
 A C G T A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGSAKATCA-
NCTGTCAATCAN
 A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGSAKATCA-
WATGCAAATGAG
 A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0016.1_Cux1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGSAKATCA------
TNAGNTGATCAACCGGT
 A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGSAKATCA-----
AATAGGGTATCAATATT
 A C G T A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGSAKATCA-----
GATGGGGTATCATTTTT
 A C G T A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGSAKATCA-
TATGCWAATBAV
 A C G T A T C G A C G T A C T G A T C G G C T A A C G T T C G A C G A T A G T C C G T A A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G