p-value: | 1e-11 |
log p-value: | -2.682e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 59.4 +/- 16.9bp |
Average Position of motif in Background | 61.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGAATATATAGC AAGGATATNTN-- |
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PB0163.1_Six6_2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGAATATATAGC-- ANNNGGATATATCCNNN |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGAATATATAGC TNNAGAACAATANATNN- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGAATATATAGC TTAAGAACAATAAATT-- |
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PB0080.1_Tbp_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAGAATATATAGC-- TCTTTATATATAAATA |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGAATATATAGC CTCATGAATATTCAT- |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGAATATATAGC ATGAATATTC--- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGAATATATAGC ATGMATATDC--- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGAATATATAGC TTTAGAACAATAAAAT-- |
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TEAD4/MA0809.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAGAATATATAGC NTGGAATGTN---- |
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