Information for 10-CYTCTDGAGTTAA (Motif 22)

G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
Reverse Opposite:
A C G T A C G T C G T A C G T A T G A C C G A T G T A C G C T A C G T A A T C G C G T A C T A G A C T G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.743
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif54.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.8 +/- 27.6bp
Average Position of motif in Background55.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CYTCTDGAGTTAA
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CYTCTDGAGTTAA
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CYTCTDGAGTTAA
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CYTCTDGAGTTAA
----TTGACTTTT
 G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CYTCTDGAGTTAA
BCNGGTTCTAGANCN--
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CYTCTDGAGTTAA
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CYTCTDGAGTTAA
NSCACTYVAV----
 A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CYTCTDGAGTTAA------
--NNNTTAGTTAACTNANN
 G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CYTCTDGAGTTAA
CGTCTAGACA---
 G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CYTCTDGAGTTAA
RSCACTYRAG----
 A C G T G T A C A G T C C G A T A T G C A C G T C G A T A C T G C G T A A C T G C G A T A C G T T G C A G T C A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T